IL_11KH_022
3D structure
- PDB id
- 11KH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S with IFRD2 and LARP1, 40S head-swiveled
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CCACU*AG
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_11KH_022 not in the Motif Atlas
- Homologous match to IL_9PN5_165
- Geometric discrepancy: 0.1541
- The information below is about IL_9PN5_165
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_26900.3
- Basepair signature
- cWW-cSH-cWS-tWH-cWW
- Number of instances in this motif group
- 6
Unit IDs
11KH|1|18|C|491
11KH|1|18|C|492
11KH|1|18|A|493
11KH|1|18|C|494
11KH|1|18|U|495
*
11KH|1|18|A|508
11KH|1|18|G|509
Current chains
- Chain 18
- 18S rRNA
Nearby chains
- Chain S4
- 40S ribosomal protein S4
- Chain S9
- 40S ribosomal protein S9
- Chain SS
- 40S ribosomal protein S24
Coloring options: