IL_11KH_074
3D structure
- PDB id
- 11KH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S with IFRD2 and LARP1, 40S head-swiveled
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CCG*CAAG
- Length
- 7 nucleotides
- Bulged bases
- 11KH|1|18|C|1701, 11KH|1|18|A|1835
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_11KH_074 not in the Motif Atlas
- Homologous match to IL_9PN5_220
- Geometric discrepancy: 0.2652
- The information below is about IL_9PN5_220
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_18228.3
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 6
Unit IDs
11KH|1|18|C|1700
11KH|1|18|C|1701
11KH|1|18|G|1702
*
11KH|1|18|C|1833
11KH|1|18|A|1834
11KH|1|18|A|1835
11KH|1|18|G|1836
Current chains
- Chain 18
- 18S rRNA
Nearby chains
- Chain 41
- eL41
- Chain IF
- IFRD2
- Chain LA
- La-related protein 1
- Chain UU
- eS26
Coloring options: