IL_11KH_120
3D structure
- PDB id
- 11KH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S with IFRD2 and LARP1, 40S head-swiveled
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GCU*GCGC
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_11KH_120 not in the Motif Atlas
- Geometric match to IL_9M86_006
- Geometric discrepancy: 0.2861
- The information below is about IL_9M86_006
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_32983.3
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 9
Unit IDs
11KH|1|28|G|978
11KH|1|28|C|979
11KH|1|28|U|980
*
11KH|1|28|G|1275
11KH|1|28|C|1276
11KH|1|28|G|1277
11KH|1|28|C|1278
Current chains
- Chain 28
- 28S rRNA
Nearby chains
- Chain L4
- 60S ribosomal protein L4
- Chain L6
- large ribosomal subunit protein eL6
- Chain L7
- 60S ribosomal protein L7
Coloring options: