IL_11KH_202

3D structure

PDB id

11KH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S with IFRD2 and LARP1, 40S head-swiveled

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GUGUAGAAUAAGUGG*CACUAC

Length

21 nucleotides

Bulged bases

11KH|1|28|A|3962

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

11KH|1|28|G|3956
11KH|1|28|U|3957
11KH|1|28|G|3958
11KH|1|28|U|3959
11KH|1|28|A|3960
11KH|1|28|G|3961
11KH|1|28|A|3962
11KH|1|28|A|3963
11KH|1|28|U|3964
11KH|1|28|A|3965
11KH|1|28|A|3966
11KH|1|28|G|3967
11KH|1|28|U|3968
11KH|1|28|G|3969
11KH|1|28|G|3970
*
11KH|1|28|C|4052
11KH|1|28|A|4053
11KH|1|28|C|4054
11KH|1|28|U|4055
11KH|1|28|A|4056
11KH|1|28|C|4057

Current chains

Chain 28

28S rRNA

Nearby chains

Chain 36

60S ribosomal protein L36