IL_11KH_232

3D structure

PDB id

11KH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S with IFRD2 and LARP1, 40S head-swiveled

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GGAAACG*CUCGCC

Length

13 nucleotides

Bulged bases

11KH|1|28|C|4895

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

11KH|1|28|G|4890
11KH|1|28|G|4891
11KH|1|28|A|4892
11KH|1|28|A|4893
11KH|1|28|A|4894
11KH|1|28|C|4895
11KH|1|28|G|4896
*
11KH|1|28|C|4924
11KH|1|28|U|4925
11KH|1|28|C|4926
11KH|1|28|G|4927
11KH|1|28|C|4928
11KH|1|28|C|4929

Current chains

Chain 28

28S rRNA

Nearby chains

Chain 14

60S ribosomal protein L14

Chain L6

large ribosomal subunit protein eL6

Chain bb

Large ribosomal subunit protein uL13