IL_12DQ_182

3D structure

PDB id

12DQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of Thermus thermophilus 70S ribosome in complex with sparsomycin, protein Y, and P-site MTI-tripeptidyl-tRNA analog ACCA-ITM at 2.75A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.75 Å

Loop

Sequence

CGGACAC*GUG

Length

10 nucleotides

Bulged bases

12DQ|1|2A|C|277, 12DQ|1|2A|U|362

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

12DQ|1|2A|C|272|||J
12DQ|1|2A|G|274
12DQ|1|2A|G|275
12DQ|1|2A|A|276
12DQ|1|2A|C|277
12DQ|1|2A|A|278
12DQ|1|2A|C|279
*
12DQ|1|2A|G|361
12DQ|1|2A|U|362
12DQ|1|2A|G|363

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains