IL_12DQ_336
3D structure
- PDB id
- 12DQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of Thermus thermophilus 70S ribosome in complex with sparsomycin, protein Y, and P-site MTI-tripeptidyl-tRNA analog ACCA-ITM at 2.75A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.75 Å
Loop
- Sequence
- GAUG*CUAAUC
- Length
- 10 nucleotides
- Bulged bases
- 12DQ|1|2a|A|1256, 12DQ|1|2a|U|1257, 12DQ|1|2a|U|1278, 12DQ|1|2a|A|1280
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
12DQ|1|2a|G|1255
12DQ|1|2a|A|1256
12DQ|1|2a|U|1257
12DQ|1|2a|G|1258
*
12DQ|1|2a|C|1277
12DQ|1|2a|U|1278
12DQ|1|2a|A|1279
12DQ|1|2a|A|1280
12DQ|1|2a|U|1281
12DQ|1|2a|C|1282
Current chains
- Chain 2a
- 16S Ribosomal RNA
Nearby chains
- Chain 2c
- 30S ribosomal protein S3
- Chain 2i
- 30S ribosomal protein S9
- Chain 2j
- 30S ribosomal protein S10
- Chain 2n
- 30S ribosomal protein S14 type Z
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