IL_1ETF_002

3D structure

PDB id

1ETF (explore in PDB, NAKB, or RNA 3D Hub)

Description

REV RESPONSE ELEMENT (RRE) RNA COMPLEXED WITH REV PEPTIDE, NMR, MINIMIZED AVERAGE STRUCTURE

Experimental method

SOLUTION NMR

Resolution

Loop

Sequence

GC*GAC

Length

5 nucleotides

Bulged bases

1ETF|1|A|A|68

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_1ETF_002 not in the Motif Atlas

Geometric match to IL_7RQB_101

Geometric discrepancy: 0.3029

The information below is about IL_7RQB_101

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_37497.6

Basepair signature

cWW-L-cWW

Number of instances in this motif group

118

Unit IDs

1ETF|1|A|G|50
1ETF|1|A|C|51
*
1ETF|1|A|G|67
1ETF|1|A|A|68
1ETF|1|A|C|69

Current chains

Chain A

REV RESPONSE ELEMENT RNA

Nearby chains

Chain B

REV PEPTIDE