IL_1FEU_001
3D structure
- PDB id
- 1FEU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYSTAL STRUCTURE OF RIBOSOMAL PROTEIN TL5, ONE OF THE CTC FAMILY PROTEINS, COMPLEXED WITH A FRAGMENT OF 5S RRNA.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.3 Å
Loop
- Sequence
- CGAUGGUAG*CGAGAGUAG
- Length
- 18 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- Bacterial 5S Loop E
- Broad Annotation
- Loop E
- Motif group
- IL_56455.5
- Basepair signature
- cWW-tSH-tHW-L-R-L-R-L-R-tWH-tHS-cWW
- Number of instances in this motif group
- 7
Unit IDs
1FEU|1|B|C|71
1FEU|1|B|G|72
1FEU|1|B|A|73
1FEU|1|B|U|74
1FEU|1|B|G|75
1FEU|1|B|G|76
1FEU|1|B|U|77
1FEU|1|B|A|78
1FEU|1|B|G|79
*
1FEU|1|C|C|97
1FEU|1|C|G|98
1FEU|1|C|A|99
1FEU|1|C|G|100
1FEU|1|C|A|101
1FEU|1|C|G|102
1FEU|1|C|U|103
1FEU|1|C|A|104
1FEU|1|C|G|105
Current chains
- Chain B
- 19 NT FRAGMENT OF 5S RRNA
- Chain C
- 21 NT FRAGMENT OF 5S RRNA
Nearby chains
- Chain A
- 50S RIBOSOMAL PROTEIN L25
- Chain D
- 50S RIBOSOMAL PROTEIN L25
- Chain E
- 19 NT FRAGMENT OF 5S RRNA
- Chain F
- 21 NT FRAGMENT OF 5S RRNA
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