IL_1FG0_001

3D structure

PDB id

1FG0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

LARGE RIBOSOMAL SUBUNIT COMPLEXED WITH A 13 BP MINIHELIX-PUROMYCIN COMPOUND

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GGGG*UAC

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_1FG0_001 not in the Motif Atlas

Homologous match to IL_4V9F_072

Geometric discrepancy: 0.0473

The information below is about IL_4V9F_072

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_55516.2

Basepair signature

cWW-cWW-cSH-cWW

Number of instances in this motif group

7

Unit IDs

1FG0|1|A|G|2090
1FG0|1|A|G|2091
1FG0|1|A|G|2092
1FG0|1|A|G|2093
*
1FG0|1|A|U|2652
1FG0|1|A|A|2653
1FG0|1|A|C|2654

Current chains

Chain A

23S RIBOSOMAL RNA

Nearby chains