IL_1FG0_014

3D structure

PDB id

1FG0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

LARGE RIBOSOMAL SUBUNIT COMPLEXED WITH A 13 BP MINIHELIX-PUROMYCIN COMPOUND

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

UUC*GUGAG

Length

8 nucleotides

Bulged bases

1FG0|1|A|G|2611, 1FG0|1|A|A|2612

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_1FG0_014 not in the Motif Atlas

Geometric match to IL_4V9F_087

Geometric discrepancy: 0.0526

The information below is about IL_4V9F_087

Detailed Annotation

Isolated non-canonical cWW with bulges

Broad Annotation

Isolated non-canonical cWW with bulges

Motif group

IL_07785.1

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

33

Unit IDs

1FG0|1|A|U|2545
1FG0|1|A|U|2546
1FG0|1|A|C|2547
*
1FG0|1|A|G|2609
1FG0|1|A|U|2610
1FG0|1|A|G|2611
1FG0|1|A|A|2612
1FG0|1|A|G|2613

Current chains

Chain A

23S RIBOSOMAL RNA

Nearby chains