IL_1FG0_020

3D structure

PDB id

1FG0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

LARGE RIBOSOMAL SUBUNIT COMPLEXED WITH A 13 BP MINIHELIX-PUROMYCIN COMPOUND

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GAC*GUAC

Length

7 nucleotides

Bulged bases

1FG0|1|A|A|2291

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_1FG0_020 not in the Motif Atlas

Geometric match to IL_4AOB_005

Geometric discrepancy: 0.2407

The information below is about IL_4AOB_005

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_23751.1

Basepair signature

cWW-L-R-cWW

Number of instances in this motif group

5

Unit IDs

1FG0|1|A|G|2279
1FG0|1|A|A|2280
1FG0|1|A|C|2281
*
1FG0|1|A|G|2289
1FG0|1|A|U|2290
1FG0|1|A|A|2291
1FG0|1|A|C|2292

Current chains

Chain A

23S RIBOSOMAL RNA

Nearby chains