IL_1FJG_020

3D structure

PDB id

1FJG (explore in PDB, NAKB, or RNA 3D Hub)

Description

STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN COMPLEX WITH THE ANTIBIOTICS STREPTOMYCIN, SPECTINOMYCIN, AND PAROMOMYCIN

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CGGCCAAC*GG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_12582.1

Basepair signature

cWW-L-L-L-cSH-L-cWW

Number of instances in this motif group

17

Unit IDs

1FJG|1|A|C|504
1FJG|1|A|G|505
1FJG|1|A|G|506
1FJG|1|A|C|507
1FJG|1|A|C|508
1FJG|1|A|A|509
1FJG|1|A|A|510
1FJG|1|A|C|511
*
1FJG|1|A|G|540
1FJG|1|A|G|541

Current chains

Chain A

16S RIBOSOMAL RNA

Nearby chains

Chain D

30S RIBOSOMAL PROTEIN S4

Chain E

30S RIBOSOMAL PROTEIN S5

Chain L

30S RIBOSOMAL PROTEIN S12