IL_1FJG_021

3D structure

PDB id

1FJG (explore in PDB, NAKB, or RNA 3D Hub)

Description

STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN COMPLEX WITH THE ANTIBIOTICS STREPTOMYCIN, SPECTINOMYCIN, AND PAROMOMYCIN

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GUGCCAG*CGGUAAUAC

Length

16 nucleotides

Bulged bases

1FJG|1|A|A|532, 1FJG|1|A|U|534, 1FJG|1|A|A|535

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_29931.1

Basepair signature

cWW-R-R-tWH-cSW-L-R-R-L-tHS-cWW

Number of instances in this motif group

8

Unit IDs

1FJG|1|A|G|515
1FJG|1|A|U|516
1FJG|1|A|G|517
1FJG|1|A|C|518
1FJG|1|A|C|519
1FJG|1|A|A|520
1FJG|1|A|G|521
*
1FJG|1|A|C|528
1FJG|1|A|G|529
1FJG|1|A|G|530
1FJG|1|A|U|531
1FJG|1|A|A|532
1FJG|1|A|A|533
1FJG|1|A|U|534
1FJG|1|A|A|535
1FJG|1|A|C|536

Current chains

Chain A

16S RIBOSOMAL RNA

Nearby chains

Chain C

30S RIBOSOMAL PROTEIN S3

Chain D

30S RIBOSOMAL PROTEIN S4

Chain L

30S RIBOSOMAL PROTEIN S12