IL_1FJG_026

3D structure

PDB id

1FJG (explore in PDB, NAKB, or RNA 3D Hub)

Description

STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN COMPLEX WITH THE ANTIBIOTICS STREPTOMYCIN, SPECTINOMYCIN, AND PAROMOMYCIN

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

UGAAAGAC*GGGGAG

Length

14 nucleotides

Bulged bases (A, C, G, U)

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_19719.1

Basepair signature

cWW-L-R-tSH-tSH-tHS-cWW

Number of instances in this motif group

4

Unit IDs

1FJG|1|A|U|605
1FJG|1|A|G|606
1FJG|1|A|A|607
1FJG|1|A|A|608
1FJG|1|A|A|609
1FJG|1|A|G|610
1FJG|1|A|A|611
1FJG|1|A|C|612
*
1FJG|1|A|G|628
1FJG|1|A|G|629
1FJG|1|A|G|630
1FJG|1|A|G|631
1FJG|1|A|A|632
1FJG|1|A|G|633

Current chains

Chain A

16S RIBOSOMAL RNA

Nearby chains

Chain D

30S RIBOSOMAL PROTEIN S4

Chain H

30S RIBOSOMAL PROTEIN S8

Chain P

30S RIBOSOMAL PROTEIN S16