IL_1FJG_031

3D structure

PDB id

1FJG (explore in PDB, NAKB, or RNA 3D Hub)

Description

STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN COMPLEX WITH THE ANTIBIOTICS STREPTOMYCIN, SPECTINOMYCIN, AND PAROMOMYCIN

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GAGUAG*CGCAGAUAC

Length

15 nucleotides

Bulged bases

1FJG|1|A|A|702

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_33229.1

Basepair signature

cWW-cWW-tSH-tWH-tHS-tSS-tSS-R-cWW

Number of instances in this motif group

2

Unit IDs

1FJG|1|A|G|683
1FJG|1|A|A|684
1FJG|1|A|G|685
1FJG|1|A|U|686
1FJG|1|A|A|687
1FJG|1|A|G|688
*
1FJG|1|A|C|699
1FJG|1|A|G|700
1FJG|1|A|C|701
1FJG|1|A|A|702
1FJG|1|A|G|703
1FJG|1|A|A|704
1FJG|1|A|U|705
1FJG|1|A|A|706
1FJG|1|A|C|707

Current chains

Chain A

16S RIBOSOMAL RNA

Nearby chains

Chain K

30S RIBOSOMAL PROTEIN S11

Chain R

30S RIBOSOMAL PROTEIN S18