IL_1FJG_053

3D structure

PDB id

1FJG (explore in PDB, NAKB, or RNA 3D Hub)

Description

STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN COMPLEX WITH THE ANTIBIOTICS STREPTOMYCIN, SPECTINOMYCIN, AND PAROMOMYCIN

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CGGAUU*AUGAAG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_85140.1

Basepair signature

cWW-cWW-tSH-tHS-tHS-cWW

Number of instances in this motif group

11

Unit IDs

1FJG|1|A|C|1303
1FJG|1|A|G|1304
1FJG|1|A|G|1305
1FJG|1|A|A|1306
1FJG|1|A|U|1307
1FJG|1|A|U|1308
*
1FJG|1|A|A|1329
1FJG|1|A|U|1330
1FJG|1|A|G|1331
1FJG|1|A|A|1332
1FJG|1|A|A|1333
1FJG|1|A|G|1334

Current chains

Chain A

16S RIBOSOMAL RNA

Nearby chains

Chain M

30S RIBOSOMAL PROTEIN S13

Chain S

30S RIBOSOMAL PROTEIN S19

Chain V

30S RIBOSOMAL PROTEIN THX