IL_1FKA_023
3D structure
- PDB id
- 1FKA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- STRUCTURE OF FUNCTIONALLY ACTIVATED SMALL RIBOSOMAL SUBUNIT AT 3.3 A RESOLUTION
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- GGGGC*GCUC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_1FKA_023 not in the Motif Atlas
- Geometric match to IL_1J2B_001
- Geometric discrepancy: 0.3661
- The information below is about IL_1J2B_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_68909.1
- Basepair signature
- cWW-L-R-L-R-L-cWW
- Number of instances in this motif group
- 6
Unit IDs
1FKA|1|A|G|576
1FKA|1|A|G|577
1FKA|1|A|G|578
1FKA|1|A|G|579
1FKA|1|A|C|580
*
1FKA|1|A|G|628
1FKA|1|A|C|629
1FKA|1|A|U|630
1FKA|1|A|C|631
Current chains
- Chain A
- 16S RIBOSOMAL RNA
Nearby chains
- Chain H
- 30S RIBOSOMAL PROTEIN S8
- Chain O
- 30S RIBOSOMAL PROTEIN S15
- Chain Q
- 30S RIBOSOMAL PROTEIN S17
Coloring options: