3D structure

PDB id
1FKA (explore in PDB, NAKB, or RNA 3D Hub)
Description
STRUCTURE OF FUNCTIONALLY ACTIVATED SMALL RIBOSOMAL SUBUNIT AT 3.3 A RESOLUTION
Experimental method
X-RAY DIFFRACTION
Resolution
3.3 Å

Loop

Sequence
GAGUAGC*GCC
Length
10 nucleotides
Bulged bases
None detected
QA status
Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

1FKA|1|A|G|667
1FKA|1|A|A|668
1FKA|1|A|G|669
1FKA|1|A|U|670
1FKA|1|A|A|671
1FKA|1|A|G|672
1FKA|1|A|C|673
*
1FKA|1|A|G|682
1FKA|1|A|C|683
1FKA|1|A|C|691

Current chains

Chain A
16S RIBOSOMAL RNA

Nearby chains

Chain K
30S RIBOSOMAL PROTEIN S11

Coloring options:

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