IL_1FKA_037
3D structure
- PDB id
- 1FKA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- STRUCTURE OF FUNCTIONALLY ACTIVATED SMALL RIBOSOMAL SUBUNIT AT 3.3 A RESOLUTION
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- CGGGGC*GCCUUG
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_1FKA_037 not in the Motif Atlas
- Geometric match to IL_6O5F_001
- Geometric discrepancy: 0.3206
- The information below is about IL_6O5F_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_31007.1
- Basepair signature
- cWW-L-R-L-R-L-R-L-R-cWW
- Number of instances in this motif group
- 5
Unit IDs
1FKA|1|A|C|902
1FKA|1|A|G|903
1FKA|1|A|G|905
1FKA|1|A|G|906
1FKA|1|A|G|907
1FKA|1|A|C|908
*
1FKA|1|A|G|1366
1FKA|1|A|C|1367
1FKA|1|A|C|1368
1FKA|1|A|U|1369
1FKA|1|A|U|1370
1FKA|1|A|G|1371
Current chains
- Chain A
- 16S RIBOSOMAL RNA
Nearby chains
- Chain G
- 30S RIBOSOMAL PROTEIN S7
Coloring options: