IL_1FKA_044
3D structure
- PDB id
- 1FKA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- STRUCTURE OF FUNCTIONALLY ACTIVATED SMALL RIBOSOMAL SUBUNIT AT 3.3 A RESOLUTION
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- CAGC*GG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_1FKA_044 not in the Motif Atlas
- Homologous match to IL_5J7L_052
- Geometric discrepancy: 0.3339
- The information below is about IL_5J7L_052
- Detailed Annotation
- Minor groove platform
- Broad Annotation
- No text annotation
- Motif group
- IL_15052.4
- Basepair signature
- cWW-L-cWW-L
- Number of instances in this motif group
- 8
Unit IDs
1FKA|1|A|C|1110
1FKA|1|A|A|1111
1FKA|1|A|G|1112
1FKA|1|A|C|1113
*
1FKA|1|A|G|1123
1FKA|1|A|G|1124
Current chains
- Chain A
- 16S RIBOSOMAL RNA
Nearby chains
- Chain I
- 30S RIBOSOMAL PROTEIN S9
Coloring options: