IL_1FKA_062

3D structure

PDB id

1FKA (explore in PDB, NAKB, or RNA 3D Hub)

Description

STRUCTURE OF FUNCTIONALLY ACTIVATED SMALL RIBOSOMAL SUBUNIT AT 3.3 A RESOLUTION

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

GGAAGAAGCCC*GGGUGUAAAC

Length

21 nucleotides

Bulged bases

1FKA|1|A|A|407, 1FKA|1|A|A|408, 1FKA|1|A|G|409, 1FKA|1|A|U|423, 1FKA|1|A|G|424, 1FKA|1|A|U|425

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1FKA|1|A|G|405
1FKA|1|A|G|406
1FKA|1|A|A|407
1FKA|1|A|A|408
1FKA|1|A|G|409
1FKA|1|A|A|410
1FKA|1|A|A|411
1FKA|1|A|G|412
1FKA|1|A|C|413
1FKA|1|A|C|414
1FKA|1|A|C|415
*
1FKA|1|A|G|420
1FKA|1|A|G|421
1FKA|1|A|G|422
1FKA|1|A|U|423
1FKA|1|A|G|424
1FKA|1|A|U|425
1FKA|1|A|A|426
1FKA|1|A|A|427
1FKA|1|A|A|428
1FKA|1|A|C|429

Current chains

Chain A

16S RIBOSOMAL RNA

Nearby chains

Chain D

30S RIBOSOMAL PROTEIN S4