IL_1FKA_071
3D structure
- PDB id
- 1FKA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- STRUCTURE OF FUNCTIONALLY ACTIVATED SMALL RIBOSOMAL SUBUNIT AT 3.3 A RESOLUTION
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- GCUAGGUCU*GGGCCGAAGCUAACGCGUUAAGC
- Length
- 32 nucleotides
- Bulged bases
- 1FKA|1|A|A|812, 1FKA|1|A|G|813, 1FKA|1|A|U|841, 1FKA|1|A|A|842, 1FKA|1|A|A|843, 1FKA|1|A|C|844, 1FKA|1|A|G|845, 1FKA|1|A|C|846, 1FKA|1|A|G|847, 1FKA|1|A|U|848, 1FKA|1|A|U|849, 1FKA|1|A|A|850
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
1FKA|1|A|G|809
1FKA|1|A|C|810
1FKA|1|A|U|811
1FKA|1|A|A|812
1FKA|1|A|G|813
1FKA|1|A|G|814
1FKA|1|A|U|815
1FKA|1|A|C|816
1FKA|1|A|U|817
*
1FKA|1|A|G|831
1FKA|1|A|G|832
1FKA|1|A|G|833
1FKA|1|A|C|834
1FKA|1|A|C|835
1FKA|1|A|G|836
1FKA|1|A|A|837
1FKA|1|A|A|838
1FKA|1|A|G|839
1FKA|1|A|C|840
1FKA|1|A|U|841
1FKA|1|A|A|842
1FKA|1|A|A|843
1FKA|1|A|C|844
1FKA|1|A|G|845
1FKA|1|A|C|846
1FKA|1|A|G|847
1FKA|1|A|U|848
1FKA|1|A|U|849
1FKA|1|A|A|850
1FKA|1|A|A|851
1FKA|1|A|G|852
1FKA|1|A|C|853
Current chains
- Chain A
- 16S RIBOSOMAL RNA
Nearby chains
- Chain E
- 30S RIBOSOMAL PROTEIN S5
- Chain H
- 30S RIBOSOMAL PROTEIN S8
Coloring options: