IL_1FKA_072

3D structure

PDB id

1FKA (explore in PDB, NAKB, or RNA 3D Hub)

Description

STRUCTURE OF FUNCTIONALLY ACTIVATED SMALL RIBOSOMAL SUBUNIT AT 3.3 A RESOLUTION

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

GGAACC*GGGUGCCCGCGAGGGAGCC

Length

25 nucleotides

Bulged bases

1FKA|1|A|G|982, 1FKA|1|A|A|983, 1FKA|1|A|G|1003, 1FKA|1|A|G|1009, 1FKA|1|A|C|1010, 1FKA|1|A|G|1011, 1FKA|1|A|A|1012

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1FKA|1|A|G|981
1FKA|1|A|G|982
1FKA|1|A|A|983
1FKA|1|A|A|984
1FKA|1|A|C|985
1FKA|1|A|C|986
*
1FKA|1|A|G|1001
1FKA|1|A|G|1002
1FKA|1|A|G|1003
1FKA|1|A|U|1004
1FKA|1|A|G|1005
1FKA|1|A|C|1006
1FKA|1|A|C|1007
1FKA|1|A|C|1008
1FKA|1|A|G|1009
1FKA|1|A|C|1010
1FKA|1|A|G|1011
1FKA|1|A|A|1012
1FKA|1|A|G|1013
1FKA|1|A|G|1014
1FKA|1|A|G|1015
1FKA|1|A|A|1016
1FKA|1|A|G|1017
1FKA|1|A|C|1018
1FKA|1|A|C|1019

Current chains

Chain A

16S RIBOSOMAL RNA

Nearby chains