IL_1FKA_073

3D structure

PDB id

1FKA (explore in PDB, NAKB, or RNA 3D Hub)

Description

STRUCTURE OF FUNCTIONALLY ACTIVATED SMALL RIBOSOMAL SUBUNIT AT 3.3 A RESOLUTION

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

AGUUGC*GCACUCU

Length

13 nucleotides

Bulged bases

1FKA|1|A|G|1105, 1FKA|1|A|U|1106, 1FKA|1|A|U|1107, 1FKA|1|A|G|1108, 1FKA|1|A|C|1126, 1FKA|1|A|A|1127

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1FKA|1|A|A|1104
1FKA|1|A|G|1105
1FKA|1|A|U|1106
1FKA|1|A|U|1107
1FKA|1|A|G|1108
1FKA|1|A|C|1109
*
1FKA|1|A|G|1125
1FKA|1|A|C|1126
1FKA|1|A|A|1127
1FKA|1|A|C|1128
1FKA|1|A|U|1129
1FKA|1|A|C|1130
1FKA|1|A|U|1131

Current chains

Chain A

16S RIBOSOMAL RNA

Nearby chains

Chain I

30S RIBOSOMAL PROTEIN S9

Chain J

30S RIBOSOMAL PROTEIN S10