IL_1HC8_002

3D structure

PDB id

1HC8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYSTAL STRUCTURE OF A CONSERVED RIBOSOMAL PROTEIN-RNA COMPLEX

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

GAAA*UC

Length

6 nucleotides

Bulged bases

1HC8|1|C|A|138

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_80663.6

Basepair signature

cWW-tHS-cSH-cWW

Number of instances in this motif group

47

Unit IDs

1HC8|1|C|G|137
1HC8|1|C|A|138
1HC8|1|C|A|139
1HC8|1|C|A|140
*
1HC8|1|C|U|151
1HC8|1|C|C|152

Current chains

Chain C

58 NUCLEOTIDE RIBOSOMAL 23S RNA DOMAIN

Nearby chains

Chain A

RIBOSOMAL PROTEIN L11