IL_1HNW_059

3D structure

PDB id

1HNW (explore in PDB, NAKB, or RNA 3D Hub)

Description

STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN COMPLEX WITH TETRACYCLINE

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

GGAG*UGAC

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_1HNW_059 not in the Motif Atlas

Homologous match to IL_4LFB_060

Geometric discrepancy: 0.1

The information below is about IL_4LFB_060

Detailed Annotation

Double sheared

Broad Annotation

Double sheared

Motif group

IL_09705.15

Basepair signature

cWW-tSH-tHS-cWW

Number of instances in this motif group

34

Unit IDs

1HNW|1|A|G|1416
1HNW|1|A|G|1417
1HNW|1|A|A|1418
1HNW|1|A|G|1419
*
1HNW|1|A|U|1481
1HNW|1|A|G|1482
1HNW|1|A|A|1483
1HNW|1|A|C|1484

Current chains

Chain A

16S RIBOSOMAL RNA

Nearby chains