3D structure

PDB id
1HNW (explore in PDB, NAKB, or RNA 3D Hub)
Description
STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN COMPLEX WITH TETRACYCLINE
Experimental method
X-RAY DIFFRACTION
Resolution
3.4 Å

Loop

Sequence
GUUGCCAGC*GGGCACUC
Length
17 nucleotides
Bulged bases
1HNW|1|A|U|1125
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

1HNW|1|A|G|1124
1HNW|1|A|U|1125
1HNW|1|A|U|1126
1HNW|1|A|G|1127
1HNW|1|A|C|1128
1HNW|1|A|C|1129
1HNW|1|A|A|1130
1HNW|1|A|G|1131
1HNW|1|A|C|1132
*
1HNW|1|A|G|1142
1HNW|1|A|G|1143
1HNW|1|A|G|1144
1HNW|1|A|C|1145
1HNW|1|A|A|1146
1HNW|1|A|C|1147
1HNW|1|A|U|1148
1HNW|1|A|C|1149

Current chains

Chain A
16S RIBOSOMAL RNA

Nearby chains

Chain I
30S RIBOSOMAL PROTEIN S9
Chain J
30S RIBOSOMAL PROTEIN S10

Coloring options:

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