IL_1HR2_011

3D structure

PDB id

1HR2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYSTAL STRUCTURE ANALYSIS OF A MUTANT P4-P6 DOMAIN (DELC209) OF TETRAHYMENA THEMOPHILA GROUP I INTRON.

Experimental method

X-RAY DIFFRACTION

Resolution

2.25 Å

Loop

Sequence

GUU*AC

Length

5 nucleotides

Bulged bases

1HR2|1|B|U|130

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_1HR2_011 not in the Motif Atlas

Geometric match to IL_5TBW_086

Geometric discrepancy: 0.2362

The information below is about IL_5TBW_086

Detailed Annotation

Single bulged U

Broad Annotation

No text annotation

Motif group

IL_83039.19

Basepair signature

cWW-L-cWW

Number of instances in this motif group

123

Unit IDs

1HR2|1|B|G|129
1HR2|1|B|U|130
1HR2|1|B|U|131
*
1HR2|1|B|A|192
1HR2|1|B|C|193

Current chains

Chain B

P4-P6 DELC209 MUTANT RNA RIBOZYME DOMAIN

Nearby chains

Chain A

P4-P6 DELC209 MUTANT RNA RIBOZYME DOMAIN