IL_1HR2_013

3D structure

PDB id

1HR2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYSTAL STRUCTURE ANALYSIS OF A MUTANT P4-P6 DOMAIN (DELC209) OF TETRAHYMENA THEMOPHILA GROUP I INTRON.

Experimental method

X-RAY DIFFRACTION

Resolution

2.25 Å

Loop

Sequence

CUAAG*UAUG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_1HR2_013 not in the Motif Atlas

Geometric match to IL_3IGI_012

Geometric discrepancy: 0.0977

The information below is about IL_3IGI_012

Detailed Annotation

Receptor of 11-nt loop-receptor motif

Broad Annotation

Loop-receptor motif

Motif group

IL_95104.1

Basepair signature

cWW-tWH-cWW-cSH-cWW

Number of instances in this motif group

7

Unit IDs

1HR2|1|B|C|223
1HR2|1|B|U|224
1HR2|1|B|A|225
1HR2|1|B|A|226
1HR2|1|B|G|227
*
1HR2|1|B|U|247
1HR2|1|B|A|248
1HR2|1|B|U|249
1HR2|1|B|G|250

Current chains

Chain B

P4-P6 DELC209 MUTANT RNA RIBOZYME DOMAIN

Nearby chains

Chain A

P4-P6 DELC209 MUTANT RNA RIBOZYME DOMAIN