IL_1I6U_003

3D structure

PDB id

1I6U (explore in PDB, NAKB, or RNA 3D Hub)

Description

RNA-PROTEIN INTERACTIONS: THE CRYSTAL STRUCTURE OF RIBOSOMAL PROTEIN S8/RRNA COMPLEX FROM METHANOCOCCUS JANNASCHII

Experimental method

X-RAY DIFFRACTION

Resolution

2.6 Å

Loop

Sequence

UAA*UG

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_39199.8

Basepair signature

cWW-tHS-cSH-cWW

Number of instances in this motif group

74

Unit IDs

1I6U|1|D|U|9
1I6U|1|D|A|10
1I6U|1|D|A|11
*
1I6U|1|D|U|28
1I6U|1|D|G|29

Current chains

Chain D

16S RRNA FRAGMENT

Nearby chains

Chain B

30S RIBOSOMAL PROTEIN S8P