IL_1I94_022
3D structure
- PDB id
- 1I94 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYSTAL STRUCTURES OF THE SMALL RIBOSOMAL SUBUNIT WITH TETRACYCLINE, EDEINE AND IF3
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- GUGCCAG*CGGUAAUAC
- Length
- 16 nucleotides
- Bulged bases
- 1I94|1|A|A|515, 1I94|1|A|U|517
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_1I94_022 not in the Motif Atlas
- Homologous match to IL_5J7L_025
- Geometric discrepancy: 0.4151
- The information below is about IL_5J7L_025
- Detailed Annotation
- Kink-turn related
- Broad Annotation
- No text annotation
- Motif group
- IL_54177.4
- Basepair signature
- cWW-cSW-tWH-L-R-L-R-tHS-cWW
- Number of instances in this motif group
- 4
Unit IDs
1I94|1|A|G|498
1I94|1|A|U|499
1I94|1|A|G|500
1I94|1|A|C|501
1I94|1|A|C|502
1I94|1|A|A|503
1I94|1|A|G|504
*
1I94|1|A|C|511
1I94|1|A|G|512
1I94|1|A|G|513
1I94|1|A|U|514
1I94|1|A|A|515
1I94|1|A|A|516
1I94|1|A|U|517
1I94|1|A|A|518
1I94|1|A|C|519
Current chains
- Chain A
- 16S RRNA
Nearby chains
- Chain C
- 30S RIBOSOMAL PROTEIN S3
- Chain L
- 30S RIBOSOMAL PROTEIN S12
Coloring options: