IL_1I95_068

3D structure

PDB id

1I95 (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYSTAL STRUCTURE OF THE 30S RIBOSOMAL SUBUNIT FROM THERMUS THERMOPHILUS IN COMPLEX WITH EDEINE

Experimental method

X-RAY DIFFRACTION

Resolution

4.5 Å

Loop

Sequence

GGGAG*UGACU

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_1I95_068 not in the Motif Atlas

Geometric match to IL_5J7L_274

Geometric discrepancy: 0.3137

The information below is about IL_5J7L_274

Detailed Annotation

Triple sheared

Broad Annotation

No text annotation

Motif group

IL_17948.2

Basepair signature

cWW-L-R-tSH-tHS-cWW

Number of instances in this motif group

13

Unit IDs

1I95|1|A|G|1397
1I95|1|A|G|1398
1I95|1|A|G|1399
1I95|1|A|A|1400
1I95|1|A|G|1401
*
1I95|1|A|U|1458
1I95|1|A|G|1459
1I95|1|A|A|1460
1I95|1|A|C|1461
1I95|1|A|U|1462

Current chains

Chain A

16S RRNA

Nearby chains