IL_1I96_067
3D structure
- PDB id
- 1I96 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYSTAL STRUCTURE OF THE 30S RIBOSOMAL SUBUNIT FROM THERMUS THERMOPHILUS IN COMPLEX WITH THE TRANSLATION INITIATION FACTOR IF3 (C-TERMINAL DOMAIN)
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 4.2 Å
Loop
- Sequence
- GACAACC*GGCUAAUC
- Length
- 15 nucleotides
- Bulged bases
- 1I96|1|A|U|167
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_1I96_067 not in the Motif Atlas
- Homologous match to IL_6CZR_121
- Geometric discrepancy: 0.1758
- The information below is about IL_6CZR_121
- Detailed Annotation
- tWH-tWH-tHW-tHW
- Broad Annotation
- No text annotation
- Motif group
- IL_80604.5
- Basepair signature
- cWW-L-R-tWH-tWH-tHW-L-R-cWW
- Number of instances in this motif group
- 4
Unit IDs
1I96|1|A|G|142
1I96|1|A|A|143
1I96|1|A|C|144
1I96|1|A|A|145
1I96|1|A|A|146
1I96|1|A|C|147
1I96|1|A|C|148
*
1I96|1|A|G|161
1I96|1|A|G|162
1I96|1|A|C|163
1I96|1|A|U|164
1I96|1|A|A|165
1I96|1|A|A|166
1I96|1|A|U|167
1I96|1|A|C|168
Current chains
- Chain A
- 16S RRNA
Nearby chains
- Chain T
- 30S RIBOSOMAL PROTEIN S20
Coloring options: