3D structure

PDB id
1I96 (explore in PDB, NAKB, or RNA 3D Hub)
Description
CRYSTAL STRUCTURE OF THE 30S RIBOSOMAL SUBUNIT FROM THERMUS THERMOPHILUS IN COMPLEX WITH THE TRANSLATION INITIATION FACTOR IF3 (C-TERMINAL DOMAIN)
Experimental method
X-RAY DIFFRACTION
Resolution
4.2 Å

Loop

Sequence
GUUGCCAGC*GGGCACUC
Length
17 nucleotides
Bulged bases
1I96|1|A|U|1107, 1I96|1|A|C|1111
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

1I96|1|A|G|1106
1I96|1|A|U|1107
1I96|1|A|U|1108
1I96|1|A|G|1109
1I96|1|A|C|1110
1I96|1|A|C|1111
1I96|1|A|A|1112
1I96|1|A|G|1113
1I96|1|A|C|1114
*
1I96|1|A|G|1124
1I96|1|A|G|1125
1I96|1|A|G|1126
1I96|1|A|C|1127
1I96|1|A|A|1128
1I96|1|A|C|1129
1I96|1|A|U|1130
1I96|1|A|C|1131

Current chains

Chain A
16S RRNA

Nearby chains

Chain I
30S RIBOSOMAL PROTEIN S9
Chain J
30S RIBOSOMAL PROTEIN S10

Coloring options:

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