IL_1I96_072

3D structure

PDB id

1I96 (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYSTAL STRUCTURE OF THE 30S RIBOSOMAL SUBUNIT FROM THERMUS THERMOPHILUS IN COMPLEX WITH THE TRANSLATION INITIATION FACTOR IF3 (C-TERMINAL DOMAIN)

Experimental method

X-RAY DIFFRACTION

Resolution

4.2 Å

Loop

Sequence

CCAC*GGAG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_1I96_072 not in the Motif Atlas

Homologous match to IL_4LFB_067

Geometric discrepancy: 0.1373

The information below is about IL_4LFB_067

Detailed Annotation

Double sheared

Broad Annotation

Double sheared

Motif group

IL_58355.2

Basepair signature

cWW-tSH-tHS-cWW

Number of instances in this motif group

43

Unit IDs

1I96|1|A|C|1240
1I96|1|A|C|1241
1I96|1|A|A|1242
1I96|1|A|C|1243
*
1I96|1|A|G|1254
1I96|1|A|G|1255
1I96|1|A|A|1256
1I96|1|A|G|1257

Current chains

Chain A

16S RRNA

Nearby chains

Chain U

30S RIBOSOMAL PROTEIN THX