3D structure

PDB id
1I97 (explore in PDB, NAKB, or RNA 3D Hub)
Description
CRYSTAL STRUCTURE OF THE 30S RIBOSOMAL SUBUNIT FROM THERMUS THERMOPHILUS IN COMPLEX WITH TETRACYCLINE
Experimental method
X-RAY DIFFRACTION
Resolution
4.5 Å

Loop

Sequence
GCC*GGC
Length
6 nucleotides
Bulged bases
None detected
QA status
Self-complementary: GCC,GGC

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_1I97_031 not in the Motif Atlas
Geometric match to IL_2D6F_001
Geometric discrepancy: 0.2153
The information below is about IL_2D6F_001
Detailed Annotation
Self complementary
Broad Annotation
Self complementary
Motif group
IL_52767.5
Basepair signature
cWW-L-R-cWW
Number of instances in this motif group
28

Unit IDs

1I97|1|A|G|571
1I97|1|A|C|572
1I97|1|A|C|573
*
1I97|1|A|G|632
1I97|1|A|G|633
1I97|1|A|C|634

Current chains

Chain A
16S RRNA

Nearby chains

Chain H
30S RIBOSOMAL PROTEIN S8
Chain O
30S RIBOSOMAL PROTEIN S15

Coloring options:


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