IL_1I97_040

3D structure

PDB id

1I97 (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYSTAL STRUCTURE OF THE 30S RIBOSOMAL SUBUNIT FROM THERMUS THERMOPHILUS IN COMPLEX WITH TETRACYCLINE

Experimental method

X-RAY DIFFRACTION

Resolution

4.5 Å

Loop

Sequence

CCG*CGG

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary: CCG,CGG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_1I97_040 not in the Motif Atlas

Geometric match to IL_3D0M_002

Geometric discrepancy: 0.2961

The information below is about IL_3D0M_002

Detailed Annotation

Isolated cWH basepair

Broad Annotation

No text annotation

Motif group

IL_10167.2

Basepair signature

cWW-cHW-cWW

Number of instances in this motif group

51

Unit IDs

1I97|1|A|C|663
1I97|1|A|C|664
1I97|1|A|G|665
*
1I97|1|A|C|691
1I97|1|A|G|692
1I97|1|A|G|693

Current chains

Chain A

16S RRNA

Nearby chains

Chain F

30S RIBOSOMAL PROTEIN S6

Chain K

30S RIBOSOMAL PROTEIN S11