3D structure

PDB id
1I97 (explore in PDB, NAKB, or RNA 3D Hub)
Description
CRYSTAL STRUCTURE OF THE 30S RIBOSOMAL SUBUNIT FROM THERMUS THERMOPHILUS IN COMPLEX WITH TETRACYCLINE
Experimental method
X-RAY DIFFRACTION
Resolution
4.5 Å

Loop

Sequence
GGUGAACGC*GCGUUACC
Length
17 nucleotides
Bulged bases
1I97|1|A|G|31
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

1I97|1|A|G|28
1I97|1|A|G|29
1I97|1|A|U|30
1I97|1|A|G|31
1I97|1|A|A|32
1I97|1|A|A|33
1I97|1|A|C|34
1I97|1|A|G|35
1I97|1|A|C|36
*
1I97|1|A|G|531
1I97|1|A|C|532
1I97|1|A|G|533
1I97|1|A|U|534
1I97|1|A|U|535
1I97|1|A|A|536
1I97|1|A|C|537
1I97|1|A|C|538

Current chains

Chain A
16S RRNA

Nearby chains

Chain D
30S RIBOSOMAL PROTEIN S4
Chain L
30S RIBOSOMAL PROTEIN S12

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.0512 s