3D structure

PDB id
1I97 (explore in PDB, NAKB, or RNA 3D Hub)
Description
CRYSTAL STRUCTURE OF THE 30S RIBOSOMAL SUBUNIT FROM THERMUS THERMOPHILUS IN COMPLEX WITH TETRACYCLINE
Experimental method
X-RAY DIFFRACTION
Resolution
4.5 Å

Loop

Sequence
AUGUGAAAGAC*GGGGAGCGU
Length
20 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

1I97|1|A|A|585
1I97|1|A|U|586
1I97|1|A|G|587
1I97|1|A|U|588
1I97|1|A|G|589
1I97|1|A|A|590
1I97|1|A|A|591
1I97|1|A|A|592
1I97|1|A|G|593
1I97|1|A|A|594
1I97|1|A|C|595
*
1I97|1|A|G|611
1I97|1|A|G|612
1I97|1|A|G|613
1I97|1|A|G|614
1I97|1|A|A|615
1I97|1|A|G|616
1I97|1|A|C|617
1I97|1|A|G|618
1I97|1|A|U|619

Current chains

Chain A
16S RRNA

Nearby chains

Chain D
30S RIBOSOMAL PROTEIN S4
Chain H
30S RIBOSOMAL PROTEIN S8
Chain P
30S RIBOSOMAL PROTEIN S16
Chain Q
30S RIBOSOMAL PROTEIN S17

Coloring options:

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