IL_1I97_102

3D structure

PDB id

1I97 (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYSTAL STRUCTURE OF THE 30S RIBOSOMAL SUBUNIT FROM THERMUS THERMOPHILUS IN COMPLEX WITH TETRACYCLINE

Experimental method

X-RAY DIFFRACTION

Resolution

4.5 Å

Loop

Sequence

GGGGGC*GCCUU

Length

11 nucleotides

Bulged bases

1I97|1|A|G|903

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_1I97_102 not in the Motif Atlas

Geometric match to IL_7VYX_004

Geometric discrepancy: 0.3176

The information below is about IL_7VYX_004

Detailed Annotation

Partly complementary

Broad Annotation

Partly complementary

Motif group

IL_49751.4

Basepair signature

cWW-cWW-cWW-cWW-cWW

Number of instances in this motif group

16

Unit IDs

1I97|1|A|G|902
1I97|1|A|G|903
1I97|1|A|G|904
1I97|1|A|G|905
1I97|1|A|G|906
1I97|1|A|C|907
*
1I97|1|A|G|1369
1I97|1|A|C|1370
1I97|1|A|C|1371
1I97|1|A|U|1372
1I97|1|A|U|1373

Current chains

Chain A

16S RRNA

Nearby chains