IL_1I97_109
3D structure
- PDB id
- 1I97 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYSTAL STRUCTURE OF THE 30S RIBOSOMAL SUBUNIT FROM THERMUS THERMOPHILUS IN COMPLEX WITH TETRACYCLINE
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 4.5 Å
Loop
- Sequence
- ACUACAAAGCGAUGCC*GAGCUAAUCGCAAAAAGGU
- Length
- 35 nucleotides
- Bulged bases
- 1I97|1|A|A|1237, 1I97|1|A|U|1238, 1I97|1|A|U|1259, 1I97|1|A|A|1261, 1I97|1|A|U|1262, 1I97|1|A|A|1267
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
1I97|1|A|A|1226
1I97|1|A|C|1227
1I97|1|A|U|1228
1I97|1|A|A|1229
1I97|1|A|C|1230
1I97|1|A|A|1231
1I97|1|A|A|1232
1I97|1|A|A|1233
1I97|1|A|G|1234
1I97|1|A|C|1235
1I97|1|A|G|1236
1I97|1|A|A|1237
1I97|1|A|U|1238
1I97|1|A|G|1239
1I97|1|A|C|1240
1I97|1|A|C|1241
*
1I97|1|A|G|1255
1I97|1|A|A|1256
1I97|1|A|G|1257
1I97|1|A|C|1258
1I97|1|A|U|1259
1I97|1|A|A|1260
1I97|1|A|A|1261
1I97|1|A|U|1262
1I97|1|A|C|1263
1I97|1|A|G|1264
1I97|1|A|C|1265
1I97|1|A|A|1266
1I97|1|A|A|1267
1I97|1|A|A|1268
1I97|1|A|A|1269
1I97|1|A|A|1270
1I97|1|A|G|1271
1I97|1|A|G|1272
1I97|1|A|U|1273
Current chains
- Chain A
- 16S RRNA
Nearby chains
- Chain C
- 30S RIBOSOMAL PROTEIN S3
- Chain G
- 30S RIBOSOMAL PROTEIN S7
- Chain I
- 30S RIBOSOMAL PROTEIN S9
- Chain J
- 30S RIBOSOMAL PROTEIN S10
- Chain N
- 30S RIBOSOMAL PROTEIN S14
- Chain U
- 30S RIBOSOMAL PROTEIN THX
Coloring options: