IL_1IBK_067

3D structure

PDB id

1IBK (explore in PDB, NAKB, or RNA 3D Hub)

Description

STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN COMPLEX WITH THE ANTIBIOTIC PAROMOMYCIN

Experimental method

X-RAY DIFFRACTION

Resolution

3.31 Å

Loop

Sequence

GGGAACCCGG*CUGGGGUGCCCCGCGAGGGGAGCCC

Length

35 nucleotides

Bulged bases

1IBK|1|A|C|1030, 1IBK|1|A|G|1030|||A

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1IBK|1|A|G|1002
1IBK|1|A|G|1003
1IBK|1|A|G|1003|||A
1IBK|1|A|A|1004
1IBK|1|A|A|1005
1IBK|1|A|C|1006
1IBK|1|A|C|1007
1IBK|1|A|C|1008
1IBK|1|A|G|1009
1IBK|1|A|G|1010
*
1IBK|1|A|C|1019
1IBK|1|A|U|1020
1IBK|1|A|G|1021
1IBK|1|A|G|1022
1IBK|1|A|G|1023
1IBK|1|A|G|1024
1IBK|1|A|U|1025
1IBK|1|A|G|1026
1IBK|1|A|C|1027
1IBK|1|A|C|1028
1IBK|1|A|C|1029
1IBK|1|A|C|1030
1IBK|1|A|G|1030|||A
1IBK|1|A|C|1030|||B
1IBK|1|A|G|1030|||C
1IBK|1|A|A|1030|||D
1IBK|1|A|G|1031
1IBK|1|A|G|1032
1IBK|1|A|G|1033
1IBK|1|A|G|1034
1IBK|1|A|A|1035
1IBK|1|A|G|1036
1IBK|1|A|C|1037
1IBK|1|A|C|1038
1IBK|1|A|C|1039

Current chains

Chain A

16S RIBOSOMAL RNA

Nearby chains