IL_1IBK_072

3D structure

PDB id

1IBK (explore in PDB, NAKB, or RNA 3D Hub)

Description

STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN COMPLEX WITH THE ANTIBIOTIC PAROMOMYCIN

Experimental method

X-RAY DIFFRACTION

Resolution

3.31 Å

Loop

Sequence

GUUGCCAGC*GGGCACUC

Length

17 nucleotides

Bulged bases

1IBK|1|A|U|1125, 1IBK|1|A|C|1129

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1IBK|1|A|G|1124
1IBK|1|A|U|1125
1IBK|1|A|U|1126
1IBK|1|A|G|1127
1IBK|1|A|C|1128
1IBK|1|A|C|1129
1IBK|1|A|A|1130
1IBK|1|A|G|1131
1IBK|1|A|C|1132
*
1IBK|1|A|G|1142
1IBK|1|A|G|1143
1IBK|1|A|G|1144
1IBK|1|A|C|1145
1IBK|1|A|A|1146
1IBK|1|A|C|1147
1IBK|1|A|U|1148
1IBK|1|A|C|1149

Current chains

Chain A

16S RIBOSOMAL RNA

Nearby chains

Chain I

30S RIBOSOMAL PROTEIN S9

Chain J

30S RIBOSOMAL PROTEIN S10