IL_1J9H_006
3D structure
- PDB id
- 1J9H (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of an RNA Duplex with Uridine Bulges
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 1.4 Å
Loop
- Sequence
- G(CBR)*GUC
- Length
- 5 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: CBR
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_73452.2
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 3
Unit IDs
1J9H|1|A|G|6
1J9H|1|A|CBR|7
*
1J9H|1|B|G|12
1J9H|1|B|U|13
1J9H|1|B|C|14
Current chains
- Chain A
- 5'-R(*GP*UP*GP*UP*CP*GP*(CBR)P*AP*C)-3'
- Chain B
- 5'-R(*GP*UP*GP*UP*CP*GP*(CBR)P*AP*C)-3'
Nearby chains
- Chain D
- 5'-R(*GP*UP*GP*UP*CP*GP*(CBR)P*AP*C)-3'
Coloring options: