IL_1JID_002

3D structure

PDB id

1JID (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human SRP19 in complex with helix 6 of Human SRP RNA

Experimental method

X-RAY DIFFRACTION

Resolution

1.8 Å

Loop

Sequence

GACC*GACC

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_85033.2

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

35

Unit IDs

1JID|1|B|G|138
1JID|1|B|A|139
1JID|1|B|C|140
1JID|1|B|C|141
*
1JID|1|B|G|156
1JID|1|B|A|157
1JID|1|B|C|158
1JID|1|B|C|159

Current chains

Chain B

HELIX 6 OF HUMAN SRP RNA

Nearby chains

Chain A

SIGNAL RECOGNITION PARTICLE 19 KDA PROTEIN