IL_1JZZ_075

3D structure

PDB id

1JZZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural Basis for the Interaction of Antibiotics with the Peptidyl Transferase Center in Eubacteria

Experimental method

X-RAY DIFFRACTION

Resolution

3.8 Å

Loop

Sequence

GCGAAAUUCCUUGUC*GACCUGCAC

Length

24 nucleotides

Bulged bases

1JZZ|1|A|A|1921, 1JZZ|1|A|U|1927, 1JZZ|1|A|U|1946

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1JZZ|1|A|G|1916
1JZZ|1|A|C|1917
1JZZ|1|A|G|1918
1JZZ|1|A|A|1919
1JZZ|1|A|A|1920
1JZZ|1|A|A|1921
1JZZ|1|A|U|1922
1JZZ|1|A|U|1923
1JZZ|1|A|C|1924
1JZZ|1|A|C|1925
1JZZ|1|A|U|1926
1JZZ|1|A|U|1927
1JZZ|1|A|G|1928
1JZZ|1|A|U|1929
1JZZ|1|A|C|1930
*
1JZZ|1|A|G|1942
1JZZ|1|A|A|1943
1JZZ|1|A|C|1944
1JZZ|1|A|C|1945
1JZZ|1|A|U|1946
1JZZ|1|A|G|1947
1JZZ|1|A|C|1948
1JZZ|1|A|A|1949
1JZZ|1|A|C|1950

Current chains

Chain A

23S rRNA

Nearby chains