IL_1JZZ_114

3D structure

PDB id

1JZZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural Basis for the Interaction of Antibiotics with the Peptidyl Transferase Center in Eubacteria

Experimental method

X-RAY DIFFRACTION

Resolution

3.8 Å

Loop

Sequence

UCGCAUAGACAGCCA*UGGUCGAGUGA

Length

26 nucleotides

Bulged bases

1JZZ|1|A|U|1056, 1JZZ|1|A|A|1057

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1JZZ|1|A|U|1051
1JZZ|1|A|C|1052
1JZZ|1|A|G|1053
1JZZ|1|A|C|1054
1JZZ|1|A|A|1055
1JZZ|1|A|U|1056
1JZZ|1|A|A|1057
1JZZ|1|A|G|1058
1JZZ|1|A|A|1059
1JZZ|1|A|C|1060
1JZZ|1|A|A|1061
1JZZ|1|A|G|1062
1JZZ|1|A|C|1063
1JZZ|1|A|C|1064
1JZZ|1|A|A|1065
*
1JZZ|1|A|U|1116
1JZZ|1|A|G|1117
1JZZ|1|A|G|1118
1JZZ|1|A|U|1119
1JZZ|1|A|C|1120
1JZZ|1|A|G|1121
1JZZ|1|A|A|1122
1JZZ|1|A|G|1123
1JZZ|1|A|U|1124
1JZZ|1|A|G|1125
1JZZ|1|A|A|1126

Current chains

Chain A

23S rRNA

Nearby chains