IL_1K01_024

3D structure

PDB id

1K01 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural Basis for the Interaction of Antibiotics with the Peptidyl Transferase Center in Eubacteria

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

UGUUGACC*GCGUUUAG

Length

16 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1K01|1|A|U|857
1K01|1|A|G|858
1K01|1|A|U|859
1K01|1|A|U|860
1K01|1|A|G|861
1K01|1|A|A|862
1K01|1|A|C|863
1K01|1|A|C|864
*
1K01|1|A|G|938
1K01|1|A|C|939
1K01|1|A|G|940
1K01|1|A|U|941
1K01|1|A|U|942
1K01|1|A|U|943
1K01|1|A|A|944
1K01|1|A|G|945

Current chains

Chain A

23S rRNA

Nearby chains