IL_1K01_054

3D structure

PDB id

1K01 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural Basis for the Interaction of Antibiotics with the Peptidyl Transferase Center in Eubacteria

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

UGGAG*CGUUGAAA

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1K01|1|A|U|1426
1K01|1|A|G|1427
1K01|1|A|G|1428
1K01|1|A|A|1429
1K01|1|A|G|1430
*
1K01|1|A|C|1598
1K01|1|A|G|1599
1K01|1|A|U|1600
1K01|1|A|U|1601
1K01|1|A|G|1602
1K01|1|A|A|1603
1K01|1|A|A|1604
1K01|1|A|A|1605

Current chains

Chain A

23S rRNA

Nearby chains